Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMPD1P17405 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.28■□□□□ 0.2
SMPD1P17405 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.28■□□□□ 0.2
SMPD1P17405 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.28■□□□□ 0.2
SMPD1P17405 AC098799.1-201ENST00000504752 800 ntBASIC16.28■□□□□ 0.2
SMPD1P17405 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.28■□□□□ 0.2
SMPD1P17405 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.28■□□□□ 0.2
SMPD1P17405 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.28■□□□□ 0.2
SMPD1P17405 MIR6858-201ENST00000620733 67 ntBASIC16.28■□□□□ 0.2
SMPD1P17405 AC005618.3-201ENST00000624928 458 ntBASIC16.28■□□□□ 0.2
SMPD1P17405 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.28■□□□□ 0.2
SMPD1P17405 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SMPD1P17405 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SMPD1P17405 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMPD1P17405 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.28■□□□□ 0.2
SMPD1P17405 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.28■□□□□ 0.2
SMPD1P17405 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMPD1P17405 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMPD1P17405 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.28■□□□□ 0.2
SMPD1P17405 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.27■□□□□ 0.2
SMPD1P17405 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SMPD1P17405 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.27■□□□□ 0.2
SMPD1P17405 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SMPD1P17405 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.27■□□□□ 0.2
SMPD1P17405 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.27■□□□□ 0.2
SMPD1P17405 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.27■□□□□ 0.2
SMPD1P17405 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.27■□□□□ 0.2
SMPD1P17405 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.27■□□□□ 0.2
SMPD1P17405 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.27■□□□□ 0.2
SMPD1P17405 IGHV3-37-201ENST00000518544 340 ntBASIC16.27■□□□□ 0.2
SMPD1P17405 TMCO5B-205ENST00000530020 894 ntBASIC16.27■□□□□ 0.2
SMPD1P17405 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.27■□□□□ 0.2
SMPD1P17405 AC107464.3-201ENST00000609172 737 ntBASIC16.27■□□□□ 0.2
SMPD1P17405 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMPD1P17405 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.27■□□□□ 0.2
SMPD1P17405 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
SMPD1P17405 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMPD1P17405 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMPD1P17405 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMPD1P17405 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SMPD1P17405 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SMPD1P17405 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMPD1P17405 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.27■□□□□ 0.19
SMPD1P17405 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
SMPD1P17405 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.27■□□□□ 0.19
SMPD1P17405 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMPD1P17405 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SMPD1P17405 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMPD1P17405 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.26■□□□□ 0.19
SMPD1P17405 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMPD1P17405 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMPD1P17405 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMPD1P17405 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.26■□□□□ 0.19
SMPD1P17405 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMPD1P17405 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.26■□□□□ 0.19
SMPD1P17405 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
SMPD1P17405 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMPD1P17405 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMPD1P17405 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.26■□□□□ 0.19
SMPD1P17405 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMPD1P17405 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.26■□□□□ 0.19
SMPD1P17405 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SMPD1P17405 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SMPD1P17405 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMPD1P17405 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.26■□□□□ 0.19
SMPD1P17405 HIST2H2BA-201ENST00000412169 381 ntBASIC16.26■□□□□ 0.19
SMPD1P17405 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SMPD1P17405 AC092580.1-201ENST00000433998 658 ntBASIC16.26■□□□□ 0.19
SMPD1P17405 AC012362.1-201ENST00000434906 739 ntBASIC16.26■□□□□ 0.19
SMPD1P17405 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.26■□□□□ 0.19
SMPD1P17405 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.26■□□□□ 0.19
SMPD1P17405 AC018463.1-201ENST00000456674 917 ntBASIC16.26■□□□□ 0.19
SMPD1P17405 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMPD1P17405 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.26■□□□□ 0.19
SMPD1P17405 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.26■□□□□ 0.19
SMPD1P17405 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms