Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.68□□□□□ -0.22
THBS1P07996 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
THBS1P07996 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
THBS1P07996 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
THBS1P07996 AL138709.1-201ENST00000614840 1693 ntBASIC13.68□□□□□ -0.22
THBS1P07996 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
THBS1P07996 AC015688.4-201ENST00000580780 1647 ntBASIC13.68□□□□□ -0.22
THBS1P07996 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 AC006504.5-208ENST00000588784 2401 ntBASIC13.68□□□□□ -0.22
THBS1P07996 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
THBS1P07996 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
THBS1P07996 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 HLA-V-201ENST00000429037 534 ntBASIC13.67□□□□□ -0.22
THBS1P07996 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.67□□□□□ -0.22
THBS1P07996 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 TDH-203ENST00000531764 1110 ntBASIC13.67□□□□□ -0.22
THBS1P07996 AC103988.2-201ENST00000561804 725 ntBASIC13.67□□□□□ -0.22
THBS1P07996 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.67□□□□□ -0.22
THBS1P07996 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.67□□□□□ -0.22
THBS1P07996 AC010319.3-201ENST00000597028 470 ntBASIC13.67□□□□□ -0.22
THBS1P07996 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 RPSAP52-203ENST00000622976 1023 ntBASIC13.67□□□□□ -0.22
THBS1P07996 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
THBS1P07996 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS1P07996 SBF1P1-201ENST00000444527 5631 ntBASIC13.67□□□□□ -0.22
THBS1P07996 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS1P07996 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS1P07996 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 AP000593.2-201ENST00000542775 1433 ntBASIC13.66□□□□□ -0.22
THBS1P07996 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms