Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HMGN1P05114 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HMGN1P05114 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.5□□□□□ -0.25
HMGN1P05114 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 AL139094.1-201ENST00000405549 1188 ntBASIC13.5□□□□□ -0.25
HMGN1P05114 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.5□□□□□ -0.25
HMGN1P05114 MYADML-201ENST00000474610 2147 ntBASIC13.5□□□□□ -0.25
HMGN1P05114 TMEM198B-204ENST00000484016 896 ntBASIC13.5□□□□□ -0.25
HMGN1P05114 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
HMGN1P05114 AC022616.1-201ENST00000518688 554 ntBASIC13.5□□□□□ -0.25
HMGN1P05114 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.5□□□□□ -0.25
HMGN1P05114 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.5□□□□□ -0.25
HMGN1P05114 RARRES2P5-201ENST00000564013 466 ntBASIC13.5□□□□□ -0.25
HMGN1P05114 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.5□□□□□ -0.25
HMGN1P05114 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 AC015911.4-201ENST00000588022 1070 ntBASIC13.5□□□□□ -0.25
HMGN1P05114 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.5□□□□□ -0.25
HMGN1P05114 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.5□□□□□ -0.25
HMGN1P05114 AL049840.4-201ENST00000602422 811 ntBASIC13.5□□□□□ -0.25
HMGN1P05114 AL590560.3-201ENST00000623350 461 ntBASIC13.5□□□□□ -0.25
HMGN1P05114 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.5□□□□□ -0.25
HMGN1P05114 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HMGN1P05114 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HMGN1P05114 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HMGN1P05114 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.5□□□□□ -0.25
HMGN1P05114 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
HMGN1P05114 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMGN1P05114 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HMGN1P05114 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HMGN1P05114 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 AC100757.3-201ENST00000622361 1406 ntBASIC13.49□□□□□ -0.25
HMGN1P05114 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.49□□□□□ -0.25
HMGN1P05114 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HMGN1P05114 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.49□□□□□ -0.25
HMGN1P05114 TSEN15P1-201ENST00000423257 515 ntBASIC13.49□□□□□ -0.25
HMGN1P05114 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.49□□□□□ -0.25
HMGN1P05114 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 AC004449.1-201ENST00000564240 433 ntBASIC13.49□□□□□ -0.25
HMGN1P05114 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.49□□□□□ -0.25
HMGN1P05114 RN7SL832P-201ENST00000607781 1756 ntBASIC13.49□□□□□ -0.25
HMGN1P05114 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HMGN1P05114 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HMGN1P05114 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HMGN1P05114 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGN1P05114 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms