Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHGBP05060 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 AL008718.2-201ENST00000609206 1313 ntBASIC17.71■□□□□ 0.42
CHGBP05060 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
CHGBP05060 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CHGBP05060 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 BX640514.1-201ENST00000583223 1918 ntBASIC17.7■□□□□ 0.42
CHGBP05060 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.7■□□□□ 0.42
CHGBP05060 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.7■□□□□ 0.42
CHGBP05060 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.7■□□□□ 0.42
CHGBP05060 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CHGBP05060 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.7■□□□□ 0.42
CHGBP05060 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.7■□□□□ 0.42
CHGBP05060 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.7■□□□□ 0.42
CHGBP05060 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.7■□□□□ 0.42
CHGBP05060 POM121L10P-201ENST00000436994 1285 ntBASIC17.7■□□□□ 0.42
CHGBP05060 PFN1P12-201ENST00000455938 534 ntBASIC17.7■□□□□ 0.42
CHGBP05060 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CHGBP05060 AL160314.3-201ENST00000556041 767 ntBASIC17.7■□□□□ 0.42
CHGBP05060 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHGBP05060 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.7■□□□□ 0.42
CHGBP05060 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHGBP05060 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CHGBP05060 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.7■□□□□ 0.42
CHGBP05060 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.7■□□□□ 0.42
CHGBP05060 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CHGBP05060 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CHGBP05060 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 AC026748.1-201ENST00000624349 3251 ntBASIC17.69■□□□□ 0.42
CHGBP05060 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 DPM3-202ENST00000368399 517 ntBASIC17.69■□□□□ 0.42
CHGBP05060 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.69■□□□□ 0.42
CHGBP05060 GPAA1P2-201ENST00000417923 928 ntBASIC17.69■□□□□ 0.42
CHGBP05060 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.69■□□□□ 0.42
CHGBP05060 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.69■□□□□ 0.42
CHGBP05060 AC005324.6-201ENST00000587972 613 ntBASIC17.69■□□□□ 0.42
CHGBP05060 MIR6787-201ENST00000616675 61 ntBASIC17.69■□□□□ 0.42
CHGBP05060 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CHGBP05060 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.69■□□□□ 0.42
CHGBP05060 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHGBP05060 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHGBP05060 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHGBP05060 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.69■□□□□ 0.42
CHGBP05060 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.68■□□□□ 0.42
CHGBP05060 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 KRT8P29-201ENST00000420409 1371 ntBASIC17.68■□□□□ 0.42
CHGBP05060 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.68■□□□□ 0.42
CHGBP05060 AL513477.1-201ENST00000602865 2407 ntBASIC17.68■□□□□ 0.42
CHGBP05060 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHGBP05060 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms