Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERBB2P04626 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERBB2P04626 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERBB2P04626 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERBB2P04626 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERBB2P04626 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERBB2P04626 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
ERBB2P04626 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.55■□□□□ 0.08
ERBB2P04626 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
ERBB2P04626 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 AC012617.1-204ENST00000586340 2305 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 AC117489.1-201ENST00000625169 3217 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 KRT8P28-201ENST00000433288 1390 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.54■□□□□ 0.08
ERBB2P04626 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.54■□□□□ 0.08
ERBB2P04626 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 KRT223P-202ENST00000449164 1292 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 CICP12-201ENST00000455801 843 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.54■□□□□ 0.08
ERBB2P04626 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 AC017083.2-201ENST00000608069 979 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 AC133552.6-201ENST00000613406 534 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 AL136301.1-201ENST00000615830 422 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.54■□□□□ 0.08
ERBB2P04626 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ERBB2P04626 COX11-210ENST00000639671 696 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.54■□□□□ 0.08
ERBB2P04626 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 AL023775.1-201ENST00000454907 1746 ntBASIC15.54■□□□□ 0.08
ERBB2P04626 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ERBB2P04626 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERBB2P04626 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
ERBB2P04626 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.53■□□□□ 0.08
ERBB2P04626 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.53■□□□□ 0.08
ERBB2P04626 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.53■□□□□ 0.08
ERBB2P04626 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 OR8S1-201ENST00000310194 1080 ntBASIC15.53■□□□□ 0.08
ERBB2P04626 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 AC010141.1-201ENST00000411585 623 ntBASIC15.53■□□□□ 0.08
ERBB2P04626 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.53■□□□□ 0.08
ERBB2P04626 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.53■□□□□ 0.08
ERBB2P04626 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.53■□□□□ 0.08
ERBB2P04626 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
ERBB2P04626 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.53■□□□□ 0.08
ERBB2P04626 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.53■□□□□ 0.08
ERBB2P04626 AP005482.1-201ENST00000563722 1273 ntBASIC15.53■□□□□ 0.08
ERBB2P04626 MIR4741-201ENST00000579822 90 ntBASIC15.53■□□□□ 0.08
ERBB2P04626 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.53■□□□□ 0.08
ERBB2P04626 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.53■□□□□ 0.08
ERBB2P04626 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.53■□□□□ 0.08
ERBB2P04626 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.53■□□□□ 0.08
ERBB2P04626 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.53■□□□□ 0.08
ERBB2P04626 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.53■□□□□ 0.08
ERBB2P04626 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.53■□□□□ 0.08
ERBB2P04626 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ERBB2P04626 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERBB2P04626 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms