Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOC1P02654 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOC1P02654 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.23□□□□□ -0.29
APOC1P02654 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC1P02654 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOC1P02654 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.22□□□□□ -0.29
APOC1P02654 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
APOC1P02654 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.22□□□□□ -0.29
APOC1P02654 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 LINC00552-201ENST00000625151 2579 ntBASIC13.22□□□□□ -0.29
APOC1P02654 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC1P02654 AL139094.1-201ENST00000405549 1188 ntBASIC13.22□□□□□ -0.29
APOC1P02654 SOCS2P1-201ENST00000417727 557 ntBASIC13.22□□□□□ -0.29
APOC1P02654 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.22□□□□□ -0.29
APOC1P02654 DFFBP1-201ENST00000433250 979 ntBASIC13.22□□□□□ -0.29
APOC1P02654 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC1P02654 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC1P02654 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC1P02654 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC1P02654 AC022616.1-201ENST00000518688 554 ntBASIC13.22□□□□□ -0.29
APOC1P02654 RFPL4AP1-201ENST00000530883 850 ntBASIC13.22□□□□□ -0.29
APOC1P02654 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC1P02654 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC1P02654 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.22□□□□□ -0.29
APOC1P02654 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC1P02654 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.22□□□□□ -0.29
APOC1P02654 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
APOC1P02654 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
APOC1P02654 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC1P02654 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC1P02654 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC1P02654 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 FP325330.2-201ENST00000624219 5630 ntBASIC13.22□□□□□ -0.29
APOC1P02654 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOC1P02654 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC1P02654 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
APOC1P02654 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC1P02654 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
APOC1P02654 SLC7A15P-201ENST00000424028 1363 ntBASIC13.21□□□□□ -0.29
APOC1P02654 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC1P02654 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 C1QBPP1-201ENST00000400117 770 ntBASIC13.21□□□□□ -0.29
APOC1P02654 MRPS18AP1-201ENST00000414458 589 ntBASIC13.21□□□□□ -0.29
APOC1P02654 HLA-K-203ENST00000430151 1046 ntBASIC13.21□□□□□ -0.29
APOC1P02654 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
APOC1P02654 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.21□□□□□ -0.29
APOC1P02654 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC1P02654 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.21□□□□□ -0.29
APOC1P02654 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.21□□□□□ -0.29
APOC1P02654 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
APOC1P02654 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
APOC1P02654 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC1P02654 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC1P02654 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC1P02654 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms