Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
APOA1P02647 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
APOA1P02647 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 CRYGEP-201ENST00000412192 528 ntBASIC13.29□□□□□ -0.28
APOA1P02647 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.29□□□□□ -0.28
APOA1P02647 HCG4B-203ENST00000450128 991 ntBASIC13.29□□□□□ -0.28
APOA1P02647 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.29□□□□□ -0.28
APOA1P02647 AL645728.2-202ENST00000641679 227 ntBASIC13.29□□□□□ -0.28
APOA1P02647 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.29□□□□□ -0.28
APOA1P02647 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.29□□□□□ -0.28
APOA1P02647 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOA1P02647 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 AZGP1P1-201ENST00000411909 902 ntBASIC13.28□□□□□ -0.28
APOA1P02647 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.28□□□□□ -0.28
APOA1P02647 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.28□□□□□ -0.28
APOA1P02647 AL358472.4-201ENST00000633140 710 ntBASIC13.28□□□□□ -0.28
APOA1P02647 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
APOA1P02647 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
APOA1P02647 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.28□□□□□ -0.28
APOA1P02647 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOA1P02647 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APOA1P02647 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms