Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 TNRC18P1-201ENST00000502875 3650 ntBASIC12.91□□□□□ -0.34
UPK1BO75841 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
UPK1BO75841 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 AC018445.4-201ENST00000624066 2291 ntBASIC12.91□□□□□ -0.34
UPK1BO75841 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
UPK1BO75841 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 AC008620.2-201ENST00000510294 1569 ntBASIC12.91□□□□□ -0.34
UPK1BO75841 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK1BO75841 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK1BO75841 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 AC063952.2-201ENST00000498792 1227 ntBASIC12.91□□□□□ -0.34
UPK1BO75841 RNA5SP410-201ENST00000516285 106 ntBASIC12.91□□□□□ -0.34
UPK1BO75841 AP000867.3-201ENST00000524675 377 ntBASIC12.91□□□□□ -0.34
UPK1BO75841 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.91□□□□□ -0.34
UPK1BO75841 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
UPK1BO75841 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 AL359845.1-201ENST00000458202 1648 ntBASIC12.91□□□□□ -0.34
UPK1BO75841 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
UPK1BO75841 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 TUBB8P4-201ENST00000511806 1324 ntBASIC12.9□□□□□ -0.34
UPK1BO75841 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 AC011700.1-201ENST00000610409 2627 ntBASIC12.9□□□□□ -0.34
UPK1BO75841 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.9□□□□□ -0.34
UPK1BO75841 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 KRT18P8-201ENST00000581937 1246 ntBASIC12.9□□□□□ -0.34
UPK1BO75841 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.9□□□□□ -0.34
UPK1BO75841 AC005363.2-201ENST00000618631 242 ntBASIC12.9□□□□□ -0.34
UPK1BO75841 AC004790.2-201ENST00000623588 572 ntBASIC12.9□□□□□ -0.34
UPK1BO75841 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK1BO75841 DDX12P-201ENST00000432996 2947 ntBASIC12.9□□□□□ -0.34
UPK1BO75841 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK1BO75841 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
UPK1BO75841 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.9□□□□□ -0.35
UPK1BO75841 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
UPK1BO75841 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.89□□□□□ -0.35
UPK1BO75841 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms