Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 AC134407.3-201ENST00000624035 2139 ntBASIC12.24□□□□□ -0.45
CLN5O75503 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CLN5O75503 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CLN5O75503 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.24□□□□□ -0.45
CLN5O75503 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CLN5O75503 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLN5O75503 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 AC130686.1-201ENST00000622936 2466 ntBASIC12.23□□□□□ -0.45
CLN5O75503 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.23□□□□□ -0.45
CLN5O75503 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 KRT8P12-202ENST00000472924 1397 ntBASIC12.23□□□□□ -0.45
CLN5O75503 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.23□□□□□ -0.45
CLN5O75503 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CLN5O75503 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 HIST3H2BA-201ENST00000436555 524 ntBASIC12.23□□□□□ -0.45
CLN5O75503 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.23□□□□□ -0.45
CLN5O75503 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 SPDYE14P-201ENST00000442619 822 ntBASIC12.23□□□□□ -0.45
CLN5O75503 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 AC093520.2-201ENST00000561830 333 ntBASIC12.23□□□□□ -0.45
CLN5O75503 AC026150.2-201ENST00000564693 1156 ntBASIC12.23□□□□□ -0.45
CLN5O75503 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 AL671883.3-201ENST00000603274 991 ntBASIC12.23□□□□□ -0.45
CLN5O75503 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CLN5O75503 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLN5O75503 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.23□□□□□ -0.45
CLN5O75503 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLN5O75503 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLN5O75503 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLN5O75503 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.22□□□□□ -0.45
CLN5O75503 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.22□□□□□ -0.45
CLN5O75503 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLN5O75503 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLN5O75503 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CLN5O75503 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLN5O75503 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLN5O75503 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.22□□□□□ -0.45
CLN5O75503 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.22□□□□□ -0.45
CLN5O75503 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CLN5O75503 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CLN5O75503 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms