Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.74□□□□□ -0.21
IDH3BO43837 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.74□□□□□ -0.21
IDH3BO43837 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 Z92544.3-201ENST00000624747 417 ntBASIC13.74□□□□□ -0.21
IDH3BO43837 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.74□□□□□ -0.21
IDH3BO43837 AC079781.4-201ENST00000641908 219 ntBASIC13.74□□□□□ -0.21
IDH3BO43837 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.74□□□□□ -0.21
IDH3BO43837 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.74□□□□□ -0.21
IDH3BO43837 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
IDH3BO43837 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
IDH3BO43837 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IDH3BO43837 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
IDH3BO43837 AC011474.4-201ENST00000623523 2076 ntBASIC13.73□□□□□ -0.21
IDH3BO43837 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.73□□□□□ -0.21
IDH3BO43837 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.73□□□□□ -0.21
IDH3BO43837 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
IDH3BO43837 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.73□□□□□ -0.21
IDH3BO43837 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.73□□□□□ -0.21
IDH3BO43837 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
IDH3BO43837 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.73□□□□□ -0.21
IDH3BO43837 AC107890.1-201ENST00000422478 521 ntBASIC13.73□□□□□ -0.21
IDH3BO43837 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
IDH3BO43837 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.73□□□□□ -0.21
IDH3BO43837 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.73□□□□□ -0.21
IDH3BO43837 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.73□□□□□ -0.21
IDH3BO43837 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.73□□□□□ -0.21
IDH3BO43837 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
IDH3BO43837 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
IDH3BO43837 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
IDH3BO43837 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 AL118506.1-201ENST00000601296 3082 ntBASIC13.73□□□□□ -0.21
IDH3BO43837 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 BTBD7P1-201ENST00000447253 1453 ntBASIC13.73□□□□□ -0.21
IDH3BO43837 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
IDH3BO43837 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IDH3BO43837 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.73□□□□□ -0.21
IDH3BO43837 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.72□□□□□ -0.21
IDH3BO43837 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 AC113367.3-201ENST00000508316 1912 ntBASIC13.72□□□□□ -0.21
IDH3BO43837 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.72□□□□□ -0.21
IDH3BO43837 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 AL591122.2-201ENST00000624125 1853 ntBASIC13.72□□□□□ -0.21
IDH3BO43837 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IDH3BO43837 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms