Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
XRCC2O43543 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
XRCC2O43543 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
XRCC2O43543 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.95□□□□□ -0.34
XRCC2O43543 AC134312.5-201ENST00000568031 1313 ntBASIC12.95□□□□□ -0.34
XRCC2O43543 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 AL354702.1-201ENST00000442006 1960 ntBASIC12.95□□□□□ -0.34
XRCC2O43543 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.95□□□□□ -0.34
XRCC2O43543 AC245100.3-201ENST00000441281 285 ntBASIC12.95□□□□□ -0.34
XRCC2O43543 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.95□□□□□ -0.34
XRCC2O43543 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.95□□□□□ -0.34
XRCC2O43543 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
XRCC2O43543 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 AC068587.3-201ENST00000526613 355 ntBASIC12.95□□□□□ -0.34
XRCC2O43543 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 TDH-203ENST00000531764 1110 ntBASIC12.95□□□□□ -0.34
XRCC2O43543 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 AC003102.2-201ENST00000589195 1469 ntBASIC12.95□□□□□ -0.34
XRCC2O43543 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 AC015802.1-201ENST00000588104 1449 ntBASIC12.95□□□□□ -0.34
XRCC2O43543 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.95□□□□□ -0.34
XRCC2O43543 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
XRCC2O43543 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
XRCC2O43543 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.94□□□□□ -0.34
XRCC2O43543 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
XRCC2O43543 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
XRCC2O43543 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
XRCC2O43543 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 FO681548.1-201ENST00000455617 1132 ntBASIC12.94□□□□□ -0.34
XRCC2O43543 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.94□□□□□ -0.34
XRCC2O43543 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.94□□□□□ -0.34
XRCC2O43543 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 MIR5189-201ENST00000577370 114 ntBASIC12.94□□□□□ -0.34
XRCC2O43543 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 AC092135.3-201ENST00000624151 1846 ntBASIC12.94□□□□□ -0.34
XRCC2O43543 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
XRCC2O43543 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.94□□□□□ -0.34
XRCC2O43543 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
XRCC2O43543 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.94□□□□□ -0.34
XRCC2O43543 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.94□□□□□ -0.34
XRCC2O43543 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
XRCC2O43543 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms