Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 KRT8P4-201ENST00000509735 1454 ntBASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL4A3BPQ9Y5P4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 RPSAP36-202ENST00000494591 1261 ntBASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 AC138696.2-201ENST00000607376 223 ntBASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL4A3BPQ9Y5P4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.58■□□□□ 0.25
COL4A3BPQ9Y5P4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
COL4A3BPQ9Y5P4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
COL4A3BPQ9Y5P4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
COL4A3BPQ9Y5P4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL4A3BPQ9Y5P4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.58■□□□□ 0.25
COL4A3BPQ9Y5P4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COL4A3BPQ9Y5P4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 AC079178.1-201ENST00000420915 656 ntBASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 AP000593.2-201ENST00000542775 1433 ntBASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL4A3BPQ9Y5P4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.57■□□□□ 0.24
COL4A3BPQ9Y5P4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms