Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.08□□□□□ -0.15
AP4S1Q9Y587 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 CLK3P2-201ENST00000427566 1453 ntBASIC14.08□□□□□ -0.16
AP4S1Q9Y587 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 AGAP10P-201ENST00000454844 2418 ntBASIC14.08□□□□□ -0.16
AP4S1Q9Y587 BEND3P3-201ENST00000611030 2440 ntBASIC14.08□□□□□ -0.16
AP4S1Q9Y587 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 AC092865.6-201ENST00000642101 219 ntBASIC14.08□□□□□ -0.16
AP4S1Q9Y587 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.08□□□□□ -0.16
AP4S1Q9Y587 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AL365181.3-201ENST00000605886 3222 ntBASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AL133215.2-201ENST00000609242 977 ntBASIC14.07□□□□□ -0.16
AP4S1Q9Y587 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AC092902.6-201ENST00000641783 218 ntBASIC14.07□□□□□ -0.16
AP4S1Q9Y587 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms