Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 PPT1-213ENST00000641319 2388 ntBASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 CICP8-201ENST00000455800 2813 ntBASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 AL138799.1-201ENST00000448213 1675 ntBASIC10.38□□□□□ -0.75
UBE2D4Q9Y2X8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 NUS1P3-201ENST00000423502 862 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 DRD5P1-201ENST00000456605 1438 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 ZNF890P-202ENST00000530367 1156 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 AC044860.1-202ENST00000559481 777 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 AC023794.5-201ENST00000564380 2157 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 AC107373.2-201ENST00000607735 490 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 MIR6074-201ENST00000612054 107 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 AC073592.8-201ENST00000624126 511 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 AC215219.1-201ENST00000400706 1817 ntBASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
UBE2D4Q9Y2X8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms