Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.73□□□□□ -0.21
RPH3AQ9Y2J0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 LINC01101-201ENST00000622953 1884 ntBASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AC026434.2-201ENST00000506094 1078 ntBASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AC078819.1-201ENST00000547454 765 ntBASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AC012085.1-201ENST00000548270 765 ntBASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 AC244093.1-201ENST00000610837 814 ntBASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 ENPP7P14-201ENST00000621765 1040 ntBASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPH3AQ9Y2J0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 ACE3P-201ENST00000423435 1973 ntBASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 FO681548.1-201ENST00000455617 1132 ntBASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 RNA5SP486-201ENST00000515961 83 ntBASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AC004466.1-201ENST00000599515 1080 ntBASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 AC132938.4-201ENST00000623835 848 ntBASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RPH3AQ9Y2J0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPH3AQ9Y2J0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms