Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 AC007690.1-201ENST00000451924 468 ntBASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 Z98885.3-201ENST00000624882 1757 ntBASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RIMBP3Q9UFD9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 AL121994.1-201ENST00000413189 402 ntBASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 ACTG1P23-201ENST00000437653 1074 ntBASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 AL356740.1-201ENST00000602192 1297 ntBASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 KRT18P45-201ENST00000515347 1333 ntBASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 AL109954.3-201ENST00000615088 558 ntBASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC22.42■■□□□ 1.18
RIMBP3Q9UFD9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 AL049792.1-201ENST00000424708 1262 ntBASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 RN7SL47P-201ENST00000488710 299 ntBASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RIMBP3Q9UFD9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 AL596087.1-201ENST00000400979 1969 ntBASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 SERPINB8P1-201ENST00000401898 377 ntBASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 RN7SL148P-201ENST00000467120 279 ntBASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 RN7SL460P-201ENST00000582806 258 ntBASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
RIMBP3Q9UFD9 AC006504.5-208ENST00000588784 2401 ntBASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms