Protein–RNA interactions for Protein: Q9NT99

LRRC4B, Leucine-rich repeat-containing protein 4B, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4BQ9NT99 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 PPP1R2P4-201ENST00000424051 595 ntBASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 RN7SL767P-201ENST00000493013 295 ntBASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 SNORD3B-1-201ENST00000577988 758 ntBASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 AC091769.1-201ENST00000619576 568 ntBASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC4BQ9NT99 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 VENTXP3-201ENST00000546480 773 ntBASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 KLF17P1-201ENST00000547105 1126 ntBASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 COQ4-204ENST00000608951 781 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 AC019109.1-201ENST00000401725 1874 ntBASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC4BQ9NT99 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 OR52M2P-201ENST00000414298 959 ntBASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC4BQ9NT99 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms