Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.8■□□□□ 0.12
CISHQ9NSE2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CISHQ9NSE2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CISHQ9NSE2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CISHQ9NSE2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.8■□□□□ 0.12
CISHQ9NSE2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CISHQ9NSE2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 AC015802.1-201ENST00000588104 1449 ntBASIC15.79■□□□□ 0.12
CISHQ9NSE2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 BX640514.1-201ENST00000583223 1918 ntBASIC15.79■□□□□ 0.12
CISHQ9NSE2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 AC010141.1-201ENST00000411585 623 ntBASIC15.79■□□□□ 0.12
CISHQ9NSE2 FAM21FP-201ENST00000426241 1131 ntBASIC15.79■□□□□ 0.12
CISHQ9NSE2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 RNA5SP412-201ENST00000516234 123 ntBASIC15.79■□□□□ 0.12
CISHQ9NSE2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 AC008825.2-201ENST00000603374 718 ntBASIC15.79■□□□□ 0.12
CISHQ9NSE2 AC009542.2-202ENST00000619004 1067 ntBASIC15.79■□□□□ 0.12
CISHQ9NSE2 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 SHC1P1-201ENST00000425230 1745 ntBASIC15.79■□□□□ 0.12
CISHQ9NSE2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CISHQ9NSE2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.79■□□□□ 0.12
CISHQ9NSE2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 KHSRPP1-201ENST00000427983 1768 ntBASIC15.78■□□□□ 0.12
CISHQ9NSE2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 AC100850.1-201ENST00000506768 649 ntBASIC15.78■□□□□ 0.12
CISHQ9NSE2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 AC010328.2-201ENST00000597698 1111 ntBASIC15.78■□□□□ 0.12
CISHQ9NSE2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CISHQ9NSE2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CISHQ9NSE2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms