Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.06□□□□□ -0.32
C12orf4Q9NQ89 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AC092135.3-201ENST00000624151 1846 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 TARDBPP1-201ENST00000442013 1203 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 KRT18P58-201ENST00000527480 1120 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AC003101.2-201ENST00000612557 442 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AC007967.4-201ENST00000614700 386 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 ELL2P1-201ENST00000413990 1906 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 KRT8P12-202ENST00000472924 1397 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 AC145098.2-201ENST00000623593 3026 ntBASIC13.05□□□□□ -0.32
C12orf4Q9NQ89 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 MST1P2-201ENST00000457982 2291 ntBASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC102953.2-201ENST00000609755 3026 ntBASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms