Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC104989.1-201ENST00000519711 778 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 ECM1P1-201ENST00000604092 1279 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AL512343.1-201ENST00000605837 169 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AJ011931.1-201ENST00000618749 2492 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 AC131212.3-201ENST00000624087 4219 ntBASIC13.05□□□□□ -0.32
CDH20Q9HBT6 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDH20Q9HBT6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 CTBP2P5-201ENST00000454986 1264 ntBASIC13.04□□□□□ -0.32
CDH20Q9HBT6 ACA64.2-201ENST00000459014 129 ntBASIC13.04□□□□□ -0.32
CDH20Q9HBT6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 HILS1-202ENST00000545329 423 ntBASIC13.04□□□□□ -0.32
CDH20Q9HBT6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 RHOXF1P1-202ENST00000635473 501 ntBASIC13.04□□□□□ -0.32
CDH20Q9HBT6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 AC023090.2-201ENST00000625182 2110 ntBASIC13.04□□□□□ -0.32
CDH20Q9HBT6 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDH20Q9HBT6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH20Q9HBT6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms