Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 AC092135.3-201ENST00000624151 1846 ntBASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.9□□□□□ -0.51
CHRDL1Q9BU40 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CHRDL1Q9BU40 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CHRDL1Q9BU40 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
CHRDL1Q9BU40 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.9□□□□□ -0.51
CHRDL1Q9BU40 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 RN7SL399P-201ENST00000471648 279 ntBASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 GAPDHP40-201ENST00000505218 1006 ntBASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CHRDL1Q9BU40 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 DRD5P1-201ENST00000456605 1438 ntBASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.88□□□□□ -0.51
CHRDL1Q9BU40 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms