Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 RPL7P3-201ENST00000441388 714 ntBASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AC119751.2-201ENST00000504529 210 ntBASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 SAMD11P1-201ENST00000571429 661 ntBASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 BNIP3P42-201ENST00000454982 569 ntBASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 BNIP3P29-201ENST00000598302 571 ntBASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 AC011447.5-201ENST00000616168 564 ntBASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCGF1Q9BSM1 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AC067750.1-201ENST00000608826 6545 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms