Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 DGCR5-201ENST00000399539 862 ntBASIC15.71■□□□□ 0.11
TRIM11Q96F44 AP006294.1-201ENST00000415407 339 ntBASIC15.71■□□□□ 0.11
TRIM11Q96F44 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM11Q96F44 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM11Q96F44 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TRIM11Q96F44 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TRIM11Q96F44 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.71■□□□□ 0.1
TRIM11Q96F44 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TRIM11Q96F44 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
TRIM11Q96F44 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM11Q96F44 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 AC098614.1-201ENST00000368528 745 ntBASIC15.7■□□□□ 0.1
TRIM11Q96F44 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 CRB3P1-201ENST00000449338 276 ntBASIC15.7■□□□□ 0.1
TRIM11Q96F44 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 AC010319.3-201ENST00000597028 470 ntBASIC15.7■□□□□ 0.1
TRIM11Q96F44 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 BX088702.1-201ENST00000610784 235 ntBASIC15.7■□□□□ 0.1
TRIM11Q96F44 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
TRIM11Q96F44 AL138709.1-201ENST00000614840 1693 ntBASIC15.7■□□□□ 0.1
TRIM11Q96F44 RN7SL832P-201ENST00000607781 1756 ntBASIC15.7■□□□□ 0.1
TRIM11Q96F44 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM11Q96F44 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 FKBP4P6-201ENST00000457486 1332 ntBASIC15.69■□□□□ 0.1
TRIM11Q96F44 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM11Q96F44 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 MSTO2P-201ENST00000314835 1709 ntBASIC15.69■□□□□ 0.1
TRIM11Q96F44 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM11Q96F44 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM11Q96F44 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM11Q96F44 AL355864.2-201ENST00000447420 863 ntBASIC15.69■□□□□ 0.1
TRIM11Q96F44 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM11Q96F44 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM11Q96F44 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM11Q96F44 AP001002.3-201ENST00000623482 206 ntBASIC15.69■□□□□ 0.1
TRIM11Q96F44 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM11Q96F44 AC006504.5-208ENST00000588784 2401 ntBASIC15.69■□□□□ 0.1
TRIM11Q96F44 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms