Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APH1AQ96BI3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 FGD5P1-202ENST00000614866 2498 ntBASIC13.18□□□□□ -0.3
APH1AQ96BI3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 BRWD1P1-201ENST00000401091 371 ntBASIC13.18□□□□□ -0.3
APH1AQ96BI3 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.18□□□□□ -0.3
APH1AQ96BI3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 AC131206.1-201ENST00000538078 1211 ntBASIC13.18□□□□□ -0.3
APH1AQ96BI3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 AC013726.1-201ENST00000563747 2285 ntBASIC13.18□□□□□ -0.3
APH1AQ96BI3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
APH1AQ96BI3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APH1AQ96BI3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 AL023775.1-201ENST00000454907 1746 ntBASIC13.17□□□□□ -0.3
APH1AQ96BI3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 RPL13AP20-201ENST00000459725 609 ntBASIC13.17□□□□□ -0.3
APH1AQ96BI3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 MIR4683-201ENST00000579659 81 ntBASIC13.17□□□□□ -0.3
APH1AQ96BI3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 AC244157.2-201ENST00000616239 1006 ntBASIC13.17□□□□□ -0.3
APH1AQ96BI3 AL033527.4-201ENST00000641026 673 ntBASIC13.17□□□□□ -0.3
APH1AQ96BI3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
APH1AQ96BI3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 AC009093.2-202ENST00000620513 2079 ntBASIC13.17□□□□□ -0.3
APH1AQ96BI3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1AQ96BI3 AL136172.1-201ENST00000598590 1394 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms