Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.78□□□□□ -0.2
HPS1Q92902 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HPS1Q92902 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.2
HPS1Q92902 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HPS1Q92902 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HPS1Q92902 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
HPS1Q92902 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.77□□□□□ -0.2
HPS1Q92902 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HPS1Q92902 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HPS1Q92902 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
HPS1Q92902 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
HPS1Q92902 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.77□□□□□ -0.21
HPS1Q92902 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 AC236430.1-201ENST00000402231 743 ntBASIC13.77□□□□□ -0.21
HPS1Q92902 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 RPS6P14-201ENST00000425165 719 ntBASIC13.77□□□□□ -0.21
HPS1Q92902 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.77□□□□□ -0.21
HPS1Q92902 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC13.77□□□□□ -0.21
HPS1Q92902 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.77□□□□□ -0.21
HPS1Q92902 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC13.77□□□□□ -0.21
HPS1Q92902 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 AC006213.5-201ENST00000619673 288 ntBASIC13.77□□□□□ -0.21
HPS1Q92902 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 AC073592.8-201ENST00000624126 511 ntBASIC13.77□□□□□ -0.21
HPS1Q92902 AC008761.3-201ENST00000624803 892 ntBASIC13.77□□□□□ -0.21
HPS1Q92902 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.77□□□□□ -0.21
HPS1Q92902 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HPS1Q92902 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
HPS1Q92902 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.76□□□□□ -0.21
HPS1Q92902 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.76□□□□□ -0.21
HPS1Q92902 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HPS1Q92902 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HPS1Q92902 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
HPS1Q92902 AL592424.1-201ENST00000563624 1536 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HPS1Q92902 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 AL035456.1-201ENST00000456064 1369 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.76□□□□□ -0.21
HPS1Q92902 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.76□□□□□ -0.21
HPS1Q92902 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HPS1Q92902 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.76□□□□□ -0.21
HPS1Q92902 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.76□□□□□ -0.21
HPS1Q92902 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HPS1Q92902 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 AL353705.2-201ENST00000428243 662 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 AC245100.5-201ENST00000452108 331 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.76□□□□□ -0.21
HPS1Q92902 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC13.76□□□□□ -0.21
HPS1Q92902 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.76□□□□□ -0.21
HPS1Q92902 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.76□□□□□ -0.21
HPS1Q92902 AC027307.3-201ENST00000594262 1100 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 LINC02560-201ENST00000596379 459 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 AC026979.3-201ENST00000607315 403 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 AC009118.2-201ENST00000613275 655 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms