Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM4Q8WVI0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SMIM4Q8WVI0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM4Q8WVI0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM4Q8WVI0 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMIM4Q8WVI0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 AC018529.1-201ENST00000613063 361 ntBASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 LINC00628-201ENST00000628516 1289 ntBASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 AC092902.6-201ENST00000641783 218 ntBASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SMIM4Q8WVI0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SMIM4Q8WVI0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AC007967.2-201ENST00000432613 625 ntBASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AC069335.1-201ENST00000489972 472 ntBASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 KRT18P35-201ENST00000510488 1269 ntBASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SMIM4Q8WVI0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms