Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AC126177.1-201ENST00000547829 2218 ntBASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AC073347.1-201ENST00000421633 2643 ntBASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 FAM58BP-201ENST00000439056 645 ntBASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 AC136621.1-201ENST00000624017 2304 ntBASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF248Q8NDW4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
ZNF248Q8NDW4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 CLUHP2-201ENST00000426660 1303 ntBASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 AC104640.1-201ENST00000562617 2109 ntBASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 AC090616.6-203ENST00000579186 1945 ntBASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF248Q8NDW4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms