Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 AC078991.1-201ENST00000437297 610 ntBASIC15.04■□□□□ -0
SYNPOQ8N3V7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 DNM1P30-201ENST00000563586 452 ntBASIC15.04■□□□□ -0
SYNPOQ8N3V7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 AC092171.5-201ENST00000608012 942 ntBASIC15.04■□□□□ -0
SYNPOQ8N3V7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 AC112693.3-201ENST00000624819 1983 ntBASIC15.04■□□□□ -0
SYNPOQ8N3V7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 AC074138.1-201ENST00000611182 1303 ntBASIC15.03■□□□□ -0
SYNPOQ8N3V7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 AC026320.2-201ENST00000434379 478 ntBASIC15.03■□□□□ -0
SYNPOQ8N3V7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 RN7SL67P-201ENST00000492147 296 ntBASIC15.03■□□□□ -0
SYNPOQ8N3V7 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 AC087045.2-201ENST00000606279 1003 ntBASIC15.03■□□□□ -0
SYNPOQ8N3V7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SYNPOQ8N3V7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.03■□□□□ -0
SYNPOQ8N3V7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.02■□□□□ -0
SYNPOQ8N3V7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SYNPOQ8N3V7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms