Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS52Q8N1B4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 AL136309.1-201ENST00000403917 691 ntBASIC16.15■□□□□ 0.18
VPS52Q8N1B4 RPL5P21-201ENST00000404620 815 ntBASIC16.15■□□□□ 0.18
VPS52Q8N1B4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 HLA-K-203ENST00000430151 1046 ntBASIC16.15■□□□□ 0.18
VPS52Q8N1B4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 AC021723.1-201ENST00000486306 515 ntBASIC16.15■□□□□ 0.18
VPS52Q8N1B4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 CHMP4BP1-201ENST00000556017 588 ntBASIC16.15■□□□□ 0.18
VPS52Q8N1B4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VPS52Q8N1B4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
VPS52Q8N1B4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
VPS52Q8N1B4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
VPS52Q8N1B4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 SPTLC1P5-201ENST00000450718 252 ntBASIC16.14■□□□□ 0.17
VPS52Q8N1B4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 RN7SL769P-201ENST00000469386 295 ntBASIC16.14■□□□□ 0.17
VPS52Q8N1B4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS52Q8N1B4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms