Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 AC015688.4-201ENST00000580780 1647 ntBASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.38■□□□□ 0.53
UBE3BQ7Z3V4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 MTHFR-210ENST00000641407 2387 ntBASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 FER1L4-210ENST00000615531 5998 ntBASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 ISCA2P1-201ENST00000425548 448 ntBASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 AC133540.1-201ENST00000620845 1019 ntBASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 CICP14-201ENST00000629111 2732 ntBASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 KHSRPP1-201ENST00000427983 1768 ntBASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 TSPY26P-202ENST00000565928 3884 ntBASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.37■□□□□ 0.53
UBE3BQ7Z3V4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 RN7SL720P-201ENST00000488178 304 ntBASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 AL161670.2-201ENST00000557650 1227 ntBASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 FGFR3P5-201ENST00000564496 886 ntBASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 NAP1L6-202ENST00000641404 1222 ntBASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 AC009093.10-201ENST00000641956 1442 ntBASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE3BQ7Z3V4 FGD5P1-202ENST00000614866 2498 ntBASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms