Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 AC132872.1-201ENST00000566986 1195 ntBASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 RN7SL713P-201ENST00000582127 302 ntBASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 AC004945.1-201ENST00000416738 983 ntBASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 AC131206.1-201ENST00000538078 1211 ntBASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 AC008687.7-202ENST00000637404 953 ntBASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD3Q7Z3D4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms