Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 MIR4313-201ENST00000580760 101 ntBASIC13.09□□□□□ -0.31
C11orf88Q6PI97 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 MIR6080-201ENST00000617359 66 ntBASIC13.09□□□□□ -0.31
C11orf88Q6PI97 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
C11orf88Q6PI97 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
C11orf88Q6PI97 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.31
C11orf88Q6PI97 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.08□□□□□ -0.31
C11orf88Q6PI97 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
C11orf88Q6PI97 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
C11orf88Q6PI97 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
C11orf88Q6PI97 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.08□□□□□ -0.32
C11orf88Q6PI97 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AL691432.1-201ENST00000596308 1422 ntBASIC13.08□□□□□ -0.32
C11orf88Q6PI97 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 SPDYE14P-201ENST00000442619 822 ntBASIC13.08□□□□□ -0.32
C11orf88Q6PI97 COX20P2-201ENST00000452636 358 ntBASIC13.08□□□□□ -0.32
C11orf88Q6PI97 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 SLC25A39P2-201ENST00000537614 270 ntBASIC13.08□□□□□ -0.32
C11orf88Q6PI97 DUX4L27-201ENST00000554796 1261 ntBASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AL450472.2-201ENST00000603663 1156 ntBASIC13.08□□□□□ -0.32
C11orf88Q6PI97 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf88Q6PI97 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf88Q6PI97 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms