Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AC015922.1-201ENST00000421102 1152 ntBASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AC135586.1-201ENST00000539323 574 ntBASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AC011467.4-201ENST00000594891 528 ntBASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AC114501.2-201ENST00000439631 535 ntBASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AC092117.1-201ENST00000621230 3250 ntBASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM53Q6P2H8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms