Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 CLUHP2-201ENST00000426660 1303 ntBASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 MIR1202-201ENST00000408529 83 ntBASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 BNIP3P42-201ENST00000454982 569 ntBASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 BNIP3P29-201ENST00000598302 571 ntBASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 AC011447.5-201ENST00000616168 564 ntBASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TTC39BQ5VTQ0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AC113367.3-201ENST00000508316 1912 ntBASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 TLE1P1-201ENST00000422965 589 ntBASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AC067750.1-201ENST00000608826 6545 ntBASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 AC018529.2-202ENST00000611482 3087 ntBASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TTC39BQ5VTQ0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TTC39BQ5VTQ0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms