Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FKBP4P8-201ENST00000610931 1369 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 RPL3P2-204ENST00000413027 1203 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AL929302.1-201ENST00000426556 871 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 RNLS-203ENST00000437752 525 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC108724.1-201ENST00000481669 352 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 ALG1L3P-201ENST00000503331 765 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 PMEL-214ENST00000550447 901 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 ZNF877P-201ENST00000437614 612 ntBASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 RPS18P9-201ENST00000482817 460 ntBASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AC023141.7-201ENST00000430646 407 ntBASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 EMC4-208ENST00000559078 599 ntTSL 3 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 PTPN20CP-201ENST00000614090 920 ntBASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AC215219.1-201ENST00000400706 1817 ntBASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 BX322534.1-201ENST00000635574 241 ntBASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 AC215524.1-201ENST00000635696 241 ntBASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 WASH7P-201ENST00000488147 1351 ntBASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS13DQ5THJ4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 AC018442.1-201ENST00000421439 2061 ntBASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 AC145285.5-201ENST00000562217 361 ntBASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
VPS13DQ5THJ4 SNX15-201ENST00000352068 771 ntTSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms