Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AL354702.1-201ENST00000442006 1960 ntBASIC16.41■□□□□ 0.22
TSR1Q2NL82 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.41■□□□□ 0.22
TSR1Q2NL82 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AC121493.1-201ENST00000602316 450 ntBASIC16.41■□□□□ 0.22
TSR1Q2NL82 AL355385.1-201ENST00000606123 409 ntBASIC16.41■□□□□ 0.22
TSR1Q2NL82 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.41■□□□□ 0.22
TSR1Q2NL82 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 AL139400.1-201ENST00000366220 510 ntBASIC16.4■□□□□ 0.22
TSR1Q2NL82 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.4■□□□□ 0.22
TSR1Q2NL82 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 CYMP-203ENST00000474680 1263 ntBASIC16.4■□□□□ 0.22
TSR1Q2NL82 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 AC067863.1-201ENST00000494933 530 ntBASIC16.4■□□□□ 0.22
TSR1Q2NL82 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 AL138828.2-201ENST00000615812 383 ntBASIC16.4■□□□□ 0.22
TSR1Q2NL82 AC093028.1-201ENST00000622998 982 ntBASIC16.4■□□□□ 0.22
TSR1Q2NL82 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TSR1Q2NL82 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TSR1Q2NL82 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms