Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 KRT43P-201ENST00000434019 910 ntBASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 KRT17P7-201ENST00000451704 1104 ntBASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 CICP12-201ENST00000455801 843 ntBASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AC008825.2-201ENST00000603374 718 ntBASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AL162274.1-201ENST00000617191 1098 ntBASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 RHOXF1P1-202ENST00000635473 501 ntBASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 AHCYP2-201ENST00000430630 1300 ntBASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.79□□□□□ -0.36
RSPO1Q2MKA7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AC112492.5-201ENST00000421897 457 ntBASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 U91328.1-201ENST00000437528 223 ntBASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AL512343.1-201ENST00000605837 169 ntBASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 ZACNP1-201ENST00000612259 710 ntBASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AC027601.3-201ENST00000622907 509 ntBASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 AC068587.6-202ENST00000641839 5619 ntBASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RSPO1Q2MKA7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms