Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.2■□□□□ 0.66
COL16A1Q07092 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.2■□□□□ 0.66
COL16A1Q07092 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.19■□□□□ 0.66
COL16A1Q07092 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.19■□□□□ 0.66
COL16A1Q07092 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL16A1Q07092 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL16A1Q07092 HDGF-202ENST00000368206 960 ntTSL 5 BASIC19.19■□□□□ 0.66
COL16A1Q07092 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL16A1Q07092 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC19.19■□□□□ 0.66
COL16A1Q07092 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL16A1Q07092 ACTBP14-201ENST00000411655 1089 ntBASIC19.19■□□□□ 0.66
COL16A1Q07092 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC19.19■□□□□ 0.66
COL16A1Q07092 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC19.19■□□□□ 0.66
COL16A1Q07092 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC19.19■□□□□ 0.66
COL16A1Q07092 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC19.19■□□□□ 0.66
COL16A1Q07092 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC19.19■□□□□ 0.66
COL16A1Q07092 RNASEH2CP1-201ENST00000454281 502 ntBASIC19.19■□□□□ 0.66
COL16A1Q07092 RN7SL480P-201ENST00000581481 294 ntBASIC19.19■□□□□ 0.66
COL16A1Q07092 BOLA3P2-201ENST00000586496 323 ntBASIC19.19■□□□□ 0.66
COL16A1Q07092 BX322562.1-201ENST00000617004 561 ntBASIC19.19■□□□□ 0.66
COL16A1Q07092 AC079331.1-201ENST00000623200 1200 ntBASIC19.19■□□□□ 0.66
COL16A1Q07092 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.19■□□□□ 0.66
COL16A1Q07092 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.19■□□□□ 0.66
COL16A1Q07092 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.19■□□□□ 0.66
COL16A1Q07092 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
COL16A1Q07092 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.19■□□□□ 0.66
COL16A1Q07092 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.19■□□□□ 0.66
COL16A1Q07092 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL16A1Q07092 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.18■□□□□ 0.66
COL16A1Q07092 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.18■□□□□ 0.66
COL16A1Q07092 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 RNA5SP491-201ENST00000362936 118 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 AC093106.1-201ENST00000437271 352 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 KRT19P4-201ENST00000443208 943 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 AP000533.1-201ENST00000456143 1177 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 TBC1D3P6-201ENST00000505954 962 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC19.18■□□□□ 0.66
COL16A1Q07092 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 CCT8L1P-201ENST00000465400 1674 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL16A1Q07092 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.18■□□□□ 0.66
COL16A1Q07092 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL16A1Q07092 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 OR2W2P-201ENST00000406313 909 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC19.18■□□□□ 0.66
COL16A1Q07092 PHBP10-201ENST00000416467 784 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 AC000077.1-201ENST00000420012 953 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC19.18■□□□□ 0.66
COL16A1Q07092 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC19.18■□□□□ 0.66
COL16A1Q07092 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC19.18■□□□□ 0.66
COL16A1Q07092 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC19.18■□□□□ 0.66
COL16A1Q07092 MARK2P17-201ENST00000498560 841 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC19.18■□□□□ 0.66
COL16A1Q07092 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC19.18■□□□□ 0.66
COL16A1Q07092 FAM187B2P-201ENST00000577135 713 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 MIR4640-201ENST00000581824 90 ntBASIC19.18■□□□□ 0.66
COL16A1Q07092 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL16A1Q07092 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.18■□□□□ 0.66
COL16A1Q07092 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COL16A1Q07092 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.17■□□□□ 0.66
COL16A1Q07092 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 AC092115.1-201ENST00000566277 1402 ntBASIC19.17■□□□□ 0.66
COL16A1Q07092 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL16A1Q07092 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms