Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
EFNB1P98172 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB1P98172 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.24□□□□□ -0.29
EFNB1P98172 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
EFNB1P98172 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
EFNB1P98172 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB1P98172 AL356585.2-201ENST00000625078 2396 ntBASIC13.23□□□□□ -0.29
EFNB1P98172 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB1P98172 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
EFNB1P98172 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
EFNB1P98172 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 ACKR1-201ENST00000368121 1240 ntBASIC13.23□□□□□ -0.29
EFNB1P98172 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB1P98172 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNB1P98172 C1QBPP1-201ENST00000400117 770 ntBASIC13.23□□□□□ -0.29
EFNB1P98172 MIR943-201ENST00000401286 94 ntBASIC13.23□□□□□ -0.29
EFNB1P98172 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNB1P98172 MEP1AP4-201ENST00000423244 1087 ntBASIC13.23□□□□□ -0.29
EFNB1P98172 AL442647.2-201ENST00000429864 857 ntBASIC13.23□□□□□ -0.29
EFNB1P98172 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.23□□□□□ -0.29
EFNB1P98172 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNB1P98172 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 DOC2GP-202ENST00000514950 1163 ntBASIC13.23□□□□□ -0.29
EFNB1P98172 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNB1P98172 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNB1P98172 AC104794.3-201ENST00000566840 1248 ntBASIC13.23□□□□□ -0.29
EFNB1P98172 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNB1P98172 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.23□□□□□ -0.29
EFNB1P98172 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
EFNB1P98172 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.23□□□□□ -0.29
EFNB1P98172 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.23□□□□□ -0.29
EFNB1P98172 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
EFNB1P98172 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
EFNB1P98172 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.23□□□□□ -0.29
EFNB1P98172 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
EFNB1P98172 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
EFNB1P98172 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.22□□□□□ -0.29
EFNB1P98172 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 AC064801.2-201ENST00000625052 1303 ntBASIC13.22□□□□□ -0.29
EFNB1P98172 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.22□□□□□ -0.29
EFNB1P98172 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
EFNB1P98172 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.22□□□□□ -0.29
EFNB1P98172 MYCLP2-201ENST00000449268 967 ntBASIC13.22□□□□□ -0.29
EFNB1P98172 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 MESTP3-201ENST00000503460 968 ntBASIC13.22□□□□□ -0.29
EFNB1P98172 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.22□□□□□ -0.29
EFNB1P98172 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
EFNB1P98172 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.22□□□□□ -0.29
EFNB1P98172 AC099568.2-201ENST00000609194 695 ntBASIC13.22□□□□□ -0.29
EFNB1P98172 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms