Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC015910.1-201ENST00000579400 975 ntBASIC14.04□□□□□ -0.16
RPS3AP61247 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.04□□□□□ -0.16
RPS3AP61247 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.04□□□□□ -0.16
RPS3AP61247 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RPS3AP61247 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.04□□□□□ -0.16
RPS3AP61247 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RPS3AP61247 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 CU639417.3-201ENST00000624240 1404 ntBASIC14.04□□□□□ -0.16
RPS3AP61247 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.04□□□□□ -0.16
RPS3AP61247 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPS3AP61247 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPS3AP61247 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.03□□□□□ -0.16
RPS3AP61247 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RPS3AP61247 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.03□□□□□ -0.16
RPS3AP61247 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RPS3AP61247 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.03□□□□□ -0.16
RPS3AP61247 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.03□□□□□ -0.16
RPS3AP61247 DGCR5-201ENST00000399539 862 ntBASIC14.03□□□□□ -0.16
RPS3AP61247 AL442647.2-201ENST00000429864 857 ntBASIC14.03□□□□□ -0.16
RPS3AP61247 RN7SL752P-201ENST00000463779 287 ntBASIC14.03□□□□□ -0.16
RPS3AP61247 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.03□□□□□ -0.16
RPS3AP61247 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.03□□□□□ -0.16
RPS3AP61247 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.03□□□□□ -0.16
RPS3AP61247 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
RPS3AP61247 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.03□□□□□ -0.16
RPS3AP61247 AC000095.1-201ENST00000603208 874 ntBASIC14.03□□□□□ -0.16
RPS3AP61247 AL391069.4-201ENST00000609583 481 ntBASIC14.03□□□□□ -0.16
RPS3AP61247 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.03□□□□□ -0.16
RPS3AP61247 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.03□□□□□ -0.16
RPS3AP61247 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RPS3AP61247 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPS3AP61247 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RPS3AP61247 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPS3AP61247 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RPS3AP61247 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.02□□□□□ -0.16
RPS3AP61247 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RPS3AP61247 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
RPS3AP61247 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RPS3AP61247 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.02□□□□□ -0.16
RPS3AP61247 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 AC063926.2-201ENST00000623766 1308 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms