Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.64□□□□□ -0.23
CDC42P60953 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
CDC42P60953 MIR4453-201ENST00000584019 89 ntBASIC13.64□□□□□ -0.23
CDC42P60953 MIR6080-201ENST00000617359 66 ntBASIC13.64□□□□□ -0.23
CDC42P60953 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.64□□□□□ -0.23
CDC42P60953 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CDC42P60953 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC42P60953 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.64□□□□□ -0.23
CDC42P60953 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.64□□□□□ -0.23
CDC42P60953 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC42P60953 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42P60953 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42P60953 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 FP325330.2-201ENST00000624219 5630 ntBASIC13.63□□□□□ -0.23
CDC42P60953 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42P60953 ELL2P1-201ENST00000413990 1906 ntBASIC13.63□□□□□ -0.23
CDC42P60953 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.63□□□□□ -0.23
CDC42P60953 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CDC42P60953 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CDC42P60953 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42P60953 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 CEND1P1-201ENST00000451006 455 ntBASIC13.63□□□□□ -0.23
CDC42P60953 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42P60953 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42P60953 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.63□□□□□ -0.23
CDC42P60953 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.63□□□□□ -0.23
CDC42P60953 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.63□□□□□ -0.23
CDC42P60953 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.63□□□□□ -0.23
CDC42P60953 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
CDC42P60953 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.63□□□□□ -0.23
CDC42P60953 MTDHP5-201ENST00000598980 586 ntBASIC13.63□□□□□ -0.23
CDC42P60953 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 AC004461.2-201ENST00000629517 803 ntBASIC13.63□□□□□ -0.23
CDC42P60953 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42P60953 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 DGCR9-201ENST00000609630 2415 ntBASIC13.63□□□□□ -0.23
CDC42P60953 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.63□□□□□ -0.23
CDC42P60953 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 AC011840.2-201ENST00000563063 1520 ntBASIC13.63□□□□□ -0.23
CDC42P60953 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 AC073548.1-201ENST00000624088 1882 ntBASIC13.63□□□□□ -0.23
CDC42P60953 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CDC42P60953 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42P60953 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.63□□□□□ -0.23
CDC42P60953 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDC42P60953 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CDC42P60953 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC42P60953 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDC42P60953 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CDC42P60953 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC42P60953 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.62□□□□□ -0.23
CDC42P60953 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42P60953 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 AL645937.2-201ENST00000396808 931 ntBASIC13.62□□□□□ -0.23
CDC42P60953 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.62□□□□□ -0.23
CDC42P60953 SPDYE7P-202ENST00000420373 878 ntBASIC13.62□□□□□ -0.23
CDC42P60953 HLA-K-203ENST00000430151 1046 ntBASIC13.62□□□□□ -0.23
CDC42P60953 GPS2P2-201ENST00000430745 888 ntBASIC13.62□□□□□ -0.23
CDC42P60953 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.62□□□□□ -0.23
CDC42P60953 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.62□□□□□ -0.23
CDC42P60953 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.62□□□□□ -0.23
CDC42P60953 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms