Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 AC104989.1-201ENST00000519711 778 ntBASIC13.68□□□□□ -0.22
CLDN20P56880 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CLDN20P56880 MIR4259-201ENST00000584466 101 ntBASIC13.68□□□□□ -0.22
CLDN20P56880 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 AL008721.1-201ENST00000609964 604 ntBASIC13.68□□□□□ -0.22
CLDN20P56880 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CLDN20P56880 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN20P56880 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CLDN20P56880 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CLDN20P56880 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN20P56880 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CLDN20P56880 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN20P56880 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDN20P56880 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CLDN20P56880 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CLDN20P56880 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 AC022616.1-201ENST00000518688 554 ntBASIC13.67□□□□□ -0.22
CLDN20P56880 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.67□□□□□ -0.22
CLDN20P56880 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDN20P56880 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDN20P56880 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 KRT90P-201ENST00000549264 1064 ntBASIC13.67□□□□□ -0.22
CLDN20P56880 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN20P56880 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN20P56880 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDN20P56880 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDN20P56880 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 AL137783.1-201ENST00000623494 1896 ntBASIC13.67□□□□□ -0.22
CLDN20P56880 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CLDN20P56880 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN20P56880 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN20P56880 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN20P56880 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN20P56880 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms