Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 KRT17P8-201ENST00000540749 863 ntBASIC15□□□□□ -0.01
WNT3AP56704 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15□□□□□ -0.01
WNT3AP56704 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
WNT3AP56704 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15□□□□□ -0.01
WNT3AP56704 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15□□□□□ -0.01
WNT3AP56704 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15□□□□□ -0.01
WNT3AP56704 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15□□□□□ -0.01
WNT3AP56704 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15□□□□□ -0.01
WNT3AP56704 AL162274.1-201ENST00000617191 1098 ntBASIC15□□□□□ -0.01
WNT3AP56704 AP001002.3-201ENST00000623482 206 ntBASIC15□□□□□ -0.01
WNT3AP56704 AL035252.4-201ENST00000624174 288 ntBASIC15□□□□□ -0.01
WNT3AP56704 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15□□□□□ -0.01
WNT3AP56704 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15□□□□□ -0.01
WNT3AP56704 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15□□□□□ -0.01
WNT3AP56704 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
WNT3AP56704 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
WNT3AP56704 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
WNT3AP56704 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15□□□□□ -0.01
WNT3AP56704 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
WNT3AP56704 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
WNT3AP56704 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15□□□□□ -0.01
WNT3AP56704 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
WNT3AP56704 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
WNT3AP56704 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
WNT3AP56704 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
WNT3AP56704 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
WNT3AP56704 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
WNT3AP56704 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.99□□□□□ -0.01
WNT3AP56704 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.99□□□□□ -0.01
WNT3AP56704 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
WNT3AP56704 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 U91328.1-201ENST00000437528 223 ntBASIC14.99□□□□□ -0.01
WNT3AP56704 COX5BP1-201ENST00000507622 393 ntBASIC14.99□□□□□ -0.01
WNT3AP56704 ALG3P1-201ENST00000508806 1114 ntBASIC14.99□□□□□ -0.01
WNT3AP56704 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.99□□□□□ -0.01
WNT3AP56704 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.99□□□□□ -0.01
WNT3AP56704 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.99□□□□□ -0.01
WNT3AP56704 MIR4683-201ENST00000579659 81 ntBASIC14.99□□□□□ -0.01
WNT3AP56704 RN7SL713P-201ENST00000582127 302 ntBASIC14.99□□□□□ -0.01
WNT3AP56704 AC073413.1-201ENST00000603927 732 ntBASIC14.99□□□□□ -0.01
WNT3AP56704 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.99□□□□□ -0.01
WNT3AP56704 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.99□□□□□ -0.01
WNT3AP56704 RHOXF1P1-202ENST00000635473 501 ntBASIC14.99□□□□□ -0.01
WNT3AP56704 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.99□□□□□ -0.01
WNT3AP56704 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.99□□□□□ -0.01
WNT3AP56704 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
WNT3AP56704 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 MYADML-201ENST00000474610 2147 ntBASIC14.99□□□□□ -0.01
WNT3AP56704 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
WNT3AP56704 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
WNT3AP56704 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.99□□□□□ -0.01
WNT3AP56704 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.99□□□□□ -0.01
WNT3AP56704 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.98□□□□□ -0.01
WNT3AP56704 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.98□□□□□ -0.01
WNT3AP56704 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
WNT3AP56704 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
WNT3AP56704 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
WNT3AP56704 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.98□□□□□ -0.01
WNT3AP56704 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
WNT3AP56704 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
WNT3AP56704 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.98□□□□□ -0.01
WNT3AP56704 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 BOLA2P3-201ENST00000404566 256 ntBASIC14.98□□□□□ -0.01
WNT3AP56704 AC112492.5-201ENST00000421897 457 ntBASIC14.98□□□□□ -0.01
WNT3AP56704 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
WNT3AP56704 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.98□□□□□ -0.01
WNT3AP56704 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.98□□□□□ -0.01
WNT3AP56704 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.98□□□□□ -0.01
WNT3AP56704 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.98□□□□□ -0.01
WNT3AP56704 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
WNT3AP56704 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms