Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CDH11P55287 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH11P55287 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.7□□□□□ -0.22
CDH11P55287 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH11P55287 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
CDH11P55287 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH11P55287 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.69□□□□□ -0.22
CDH11P55287 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.69□□□□□ -0.22
CDH11P55287 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH11P55287 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 OR8S1-201ENST00000310194 1080 ntBASIC13.69□□□□□ -0.22
CDH11P55287 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CDH11P55287 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 AL512384.1-201ENST00000406683 331 ntBASIC13.69□□□□□ -0.22
CDH11P55287 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH11P55287 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 AC104596.2-201ENST00000512793 793 ntBASIC13.69□□□□□ -0.22
CDH11P55287 AC022447.6-201ENST00000515522 438 ntBASIC13.69□□□□□ -0.22
CDH11P55287 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 AC036164.1-201ENST00000570544 333 ntBASIC13.69□□□□□ -0.22
CDH11P55287 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH11P55287 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 LINC01115-203ENST00000606068 577 ntBASIC13.69□□□□□ -0.22
CDH11P55287 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CDH11P55287 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CDH11P55287 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH11P55287 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH11P55287 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.68□□□□□ -0.22
CDH11P55287 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
CDH11P55287 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.68□□□□□ -0.22
CDH11P55287 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDH11P55287 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDH11P55287 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CDH11P55287 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CDH11P55287 RPL13P2-201ENST00000440687 659 ntBASIC13.68□□□□□ -0.22
CDH11P55287 GPR53P-205ENST00000457298 1084 ntBASIC13.68□□□□□ -0.22
CDH11P55287 GIMAP3P-201ENST00000495150 836 ntBASIC13.68□□□□□ -0.22
CDH11P55287 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CDH11P55287 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDH11P55287 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDH11P55287 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.68□□□□□ -0.22
CDH11P55287 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.68□□□□□ -0.22
CDH11P55287 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH11P55287 RRP7BP-205ENST00000566851 833 ntBASIC13.68□□□□□ -0.22
CDH11P55287 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.68□□□□□ -0.22
CDH11P55287 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.68□□□□□ -0.22
CDH11P55287 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms