Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 KLF2P1-201ENST00000447438 1042 ntBASIC16.18■□□□□ 0.18
NCKAP1LP55160 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 MIR6720-201ENST00000611664 98 ntBASIC16.18■□□□□ 0.18
NCKAP1LP55160 Z98259.2-201ENST00000641583 609 ntBASIC16.18■□□□□ 0.18
NCKAP1LP55160 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.18■□□□□ 0.18
NCKAP1LP55160 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 AC097359.2-201ENST00000604992 2389 ntBASIC16.18■□□□□ 0.18
NCKAP1LP55160 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCKAP1LP55160 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.17■□□□□ 0.18
NCKAP1LP55160 ACTBP11-201ENST00000436287 1126 ntBASIC16.17■□□□□ 0.18
NCKAP1LP55160 POM121L10P-201ENST00000436994 1285 ntBASIC16.17■□□□□ 0.18
NCKAP1LP55160 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 AC100827.2-201ENST00000563214 1194 ntBASIC16.17■□□□□ 0.18
NCKAP1LP55160 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 AC091271.1-201ENST00000611877 1162 ntBASIC16.17■□□□□ 0.18
NCKAP1LP55160 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NCKAP1LP55160 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 AC005912.2-201ENST00000619492 2400 ntBASIC16.17■□□□□ 0.18
NCKAP1LP55160 AC215219.1-201ENST00000400706 1817 ntBASIC16.17■□□□□ 0.18
NCKAP1LP55160 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCKAP1LP55160 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 AC018735.1-201ENST00000437208 1502 ntBASIC16.16■□□□□ 0.18
NCKAP1LP55160 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCKAP1LP55160 BRWD1P1-201ENST00000401091 371 ntBASIC16.16■□□□□ 0.18
NCKAP1LP55160 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.16■□□□□ 0.18
NCKAP1LP55160 FAM58BP-201ENST00000439056 645 ntBASIC16.16■□□□□ 0.18
NCKAP1LP55160 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.16■□□□□ 0.18
NCKAP1LP55160 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.16■□□□□ 0.18
NCKAP1LP55160 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms