Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.7■□□□□ 0.26
USP11P51784 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.7■□□□□ 0.26
USP11P51784 MIR4538-201ENST00000581377 78 ntBASIC16.7■□□□□ 0.26
USP11P51784 AC007663.3-201ENST00000609632 465 ntBASIC16.7■□□□□ 0.26
USP11P51784 MIR6074-201ENST00000612054 107 ntBASIC16.7■□□□□ 0.26
USP11P51784 AL008638.5-201ENST00000623814 1298 ntBASIC16.7■□□□□ 0.26
USP11P51784 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.7■□□□□ 0.26
USP11P51784 Z98259.2-201ENST00000641583 609 ntBASIC16.7■□□□□ 0.26
USP11P51784 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.7■□□□□ 0.26
USP11P51784 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.7■□□□□ 0.26
USP11P51784 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
USP11P51784 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP11P51784 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
USP11P51784 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
USP11P51784 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
USP11P51784 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.69■□□□□ 0.26
USP11P51784 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 AL645933.1-201ENST00000440087 609 ntBASIC16.69■□□□□ 0.26
USP11P51784 KLF2P1-201ENST00000447438 1042 ntBASIC16.69■□□□□ 0.26
USP11P51784 AC021723.1-201ENST00000486306 515 ntBASIC16.69■□□□□ 0.26
USP11P51784 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.69■□□□□ 0.26
USP11P51784 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.69■□□□□ 0.26
USP11P51784 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.69■□□□□ 0.26
USP11P51784 BNIP3P13-201ENST00000599968 566 ntBASIC16.69■□□□□ 0.26
USP11P51784 AC009884.2-201ENST00000603110 324 ntBASIC16.69■□□□□ 0.26
USP11P51784 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
USP11P51784 AC022748.3-201ENST00000621828 275 ntBASIC16.69■□□□□ 0.26
USP11P51784 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.69■□□□□ 0.26
USP11P51784 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 AC018735.1-201ENST00000437208 1502 ntBASIC16.69■□□□□ 0.26
USP11P51784 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 AL008718.2-201ENST00000609206 1313 ntBASIC16.69■□□□□ 0.26
USP11P51784 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
USP11P51784 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP11P51784 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USP11P51784 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USP11P51784 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
USP11P51784 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.68■□□□□ 0.26
USP11P51784 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
USP11P51784 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
USP11P51784 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
USP11P51784 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.68■□□□□ 0.26
USP11P51784 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.68■□□□□ 0.26
USP11P51784 AC004898.1-201ENST00000451057 766 ntBASIC16.68■□□□□ 0.26
USP11P51784 AC126915.1-201ENST00000522847 1038 ntBASIC16.68■□□□□ 0.26
USP11P51784 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.68■□□□□ 0.26
USP11P51784 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.68■□□□□ 0.26
USP11P51784 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USP11P51784 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.68■□□□□ 0.26
USP11P51784 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
USP11P51784 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USP11P51784 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP11P51784 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms