Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.27□□□□□ -0.29
SRP9P49458 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.27□□□□□ -0.29
SRP9P49458 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.27□□□□□ -0.29
SRP9P49458 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.27□□□□□ -0.29
SRP9P49458 AL132655.2-201ENST00000596276 594 ntBASIC13.27□□□□□ -0.29
SRP9P49458 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.27□□□□□ -0.29
SRP9P49458 AL158212.4-201ENST00000624062 1286 ntBASIC13.27□□□□□ -0.29
SRP9P49458 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SRP9P49458 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SRP9P49458 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.27□□□□□ -0.29
SRP9P49458 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.27□□□□□ -0.29
SRP9P49458 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SRP9P49458 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
SRP9P49458 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SRP9P49458 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.27□□□□□ -0.29
SRP9P49458 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
SRP9P49458 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SRP9P49458 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SRP9P49458 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 RPL5P21-201ENST00000404620 815 ntBASIC13.26□□□□□ -0.29
SRP9P49458 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.26□□□□□ -0.29
SRP9P49458 SLC7A15P-201ENST00000424028 1363 ntBASIC13.26□□□□□ -0.29
SRP9P49458 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.26□□□□□ -0.29
SRP9P49458 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.26□□□□□ -0.29
SRP9P49458 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 AL589987.1-201ENST00000453380 819 ntBASIC13.26□□□□□ -0.29
SRP9P49458 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SRP9P49458 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.26□□□□□ -0.29
SRP9P49458 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 AC084364.1-201ENST00000551967 1556 ntBASIC13.26□□□□□ -0.29
SRP9P49458 AC023310.3-201ENST00000557027 670 ntBASIC13.26□□□□□ -0.29
SRP9P49458 AC100756.1-201ENST00000562736 682 ntBASIC13.26□□□□□ -0.29
SRP9P49458 AC138749.3-201ENST00000567691 622 ntBASIC13.26□□□□□ -0.29
SRP9P49458 AC099568.2-201ENST00000609194 695 ntBASIC13.26□□□□□ -0.29
SRP9P49458 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 AC116165.1-201ENST00000611806 668 ntBASIC13.26□□□□□ -0.29
SRP9P49458 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.26□□□□□ -0.29
SRP9P49458 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SRP9P49458 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SRP9P49458 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.26□□□□□ -0.29
SRP9P49458 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SRP9P49458 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms