Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CENPAP49450 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 AC005912.2-201ENST00000619492 2400 ntBASIC13.59□□□□□ -0.23
CENPAP49450 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.59□□□□□ -0.23
CENPAP49450 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 MEX3B-202ENST00000558133 4333 ntBASIC13.59□□□□□ -0.23
CENPAP49450 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.59□□□□□ -0.23
CENPAP49450 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.59□□□□□ -0.23
CENPAP49450 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 AC055876.3-201ENST00000431496 288 ntBASIC13.59□□□□□ -0.23
CENPAP49450 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.59□□□□□ -0.23
CENPAP49450 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.59□□□□□ -0.23
CENPAP49450 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.59□□□□□ -0.23
CENPAP49450 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 SPDYE18-201ENST00000510091 1050 ntBASIC13.59□□□□□ -0.23
CENPAP49450 AC093214.1-201ENST00000511688 1107 ntBASIC13.59□□□□□ -0.23
CENPAP49450 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 AC036164.1-201ENST00000570544 333 ntBASIC13.59□□□□□ -0.23
CENPAP49450 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.59□□□□□ -0.23
CENPAP49450 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CENPAP49450 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 AC138649.4-201ENST00000612222 287 ntBASIC13.59□□□□□ -0.23
CENPAP49450 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
CENPAP49450 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CENPAP49450 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.59□□□□□ -0.23
CENPAP49450 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CENPAP49450 AL360270.3-201ENST00000609118 1348 ntBASIC13.59□□□□□ -0.23
CENPAP49450 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CENPAP49450 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CENPAP49450 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CENPAP49450 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CENPAP49450 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CENPAP49450 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CENPAP49450 AC022144.1-201ENST00000602255 1580 ntBASIC13.58□□□□□ -0.23
CENPAP49450 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CENPAP49450 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CENPAP49450 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.58□□□□□ -0.23
CENPAP49450 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.58□□□□□ -0.23
CENPAP49450 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
CENPAP49450 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CENPAP49450 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.58□□□□□ -0.24
CENPAP49450 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.58□□□□□ -0.24
CENPAP49450 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.58□□□□□ -0.24
CENPAP49450 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.58□□□□□ -0.24
CENPAP49450 TSSK5P-201ENST00000423978 907 ntBASIC13.58□□□□□ -0.24
CENPAP49450 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.58□□□□□ -0.24
CENPAP49450 AC009407.1-201ENST00000568958 598 ntBASIC13.58□□□□□ -0.24
CENPAP49450 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CENPAP49450 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
CENPAP49450 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.58□□□□□ -0.24
CENPAP49450 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.58□□□□□ -0.24
CENPAP49450 SRD5A3P1-201ENST00000603021 949 ntBASIC13.58□□□□□ -0.24
CENPAP49450 AC008738.7-201ENST00000609744 511 ntBASIC13.58□□□□□ -0.24
CENPAP49450 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 CLK3P2-201ENST00000427566 1453 ntBASIC13.58□□□□□ -0.24
CENPAP49450 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms