Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TM4SF4P48230 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.47■□□□□ 0.23
TM4SF4P48230 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.47■□□□□ 0.23
TM4SF4P48230 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TM4SF4P48230 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.46■□□□□ 0.23
TM4SF4P48230 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.46■□□□□ 0.23
TM4SF4P48230 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TM4SF4P48230 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.46■□□□□ 0.23
TM4SF4P48230 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TM4SF4P48230 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TM4SF4P48230 FAM21EP-201ENST00000417804 985 ntBASIC16.46■□□□□ 0.23
TM4SF4P48230 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.46■□□□□ 0.23
TM4SF4P48230 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC16.46■□□□□ 0.23
TM4SF4P48230 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TM4SF4P48230 AC073869.4-201ENST00000620841 800 ntBASIC16.46■□□□□ 0.23
TM4SF4P48230 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.46■□□□□ 0.23
TM4SF4P48230 AC110057.1-201ENST00000636031 898 ntBASIC16.46■□□□□ 0.23
TM4SF4P48230 AL365181.1-201ENST00000564032 1828 ntBASIC16.46■□□□□ 0.23
TM4SF4P48230 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.46■□□□□ 0.23
TM4SF4P48230 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TM4SF4P48230 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.46■□□□□ 0.23
TM4SF4P48230 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM4SF4P48230 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TM4SF4P48230 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.46■□□□□ 0.22
TM4SF4P48230 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TM4SF4P48230 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TM4SF4P48230 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TM4SF4P48230 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.46■□□□□ 0.22
TM4SF4P48230 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.45■□□□□ 0.22
TM4SF4P48230 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.45■□□□□ 0.22
TM4SF4P48230 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.45■□□□□ 0.22
TM4SF4P48230 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 AL157823.1-201ENST00000403727 628 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TM4SF4P48230 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 KRT8P30-201ENST00000432100 650 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 AC025186.1-201ENST00000478174 870 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
TM4SF4P48230 AC113347.2-201ENST00000512350 279 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 AC100858.1-201ENST00000514059 1228 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 RN7SKP155-201ENST00000516031 288 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 AL136982.5-201ENST00000605222 294 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 AC008536.3-201ENST00000623282 1599 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 PRAL-201ENST00000624952 3286 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM4SF4P48230 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TM4SF4P48230 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
TM4SF4P48230 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.45■□□□□ 0.22
TM4SF4P48230 PDXDC2P-206ENST00000534700 1315 ntBASIC16.45■□□□□ 0.22
TM4SF4P48230 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 AC023024.2-201ENST00000623561 1993 ntBASIC16.44■□□□□ 0.22
TM4SF4P48230 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms