Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.9■□□□□ 0.3
COPB2P35606 AC073150.1-201ENST00000450406 1084 ntBASIC16.9■□□□□ 0.3
COPB2P35606 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.9■□□□□ 0.3
COPB2P35606 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.9■□□□□ 0.3
COPB2P35606 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.9■□□□□ 0.3
COPB2P35606 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.9■□□□□ 0.3
COPB2P35606 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.9■□□□□ 0.3
COPB2P35606 AL157813.1-201ENST00000612996 587 ntBASIC16.9■□□□□ 0.3
COPB2P35606 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.9■□□□□ 0.3
COPB2P35606 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COPB2P35606 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.9■□□□□ 0.3
COPB2P35606 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.9■□□□□ 0.3
COPB2P35606 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
COPB2P35606 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.89■□□□□ 0.3
COPB2P35606 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
COPB2P35606 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.89■□□□□ 0.3
COPB2P35606 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COPB2P35606 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
COPB2P35606 AC007292.2-201ENST00000593524 1812 ntBASIC16.89■□□□□ 0.29
COPB2P35606 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.89■□□□□ 0.29
COPB2P35606 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COPB2P35606 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.89■□□□□ 0.29
COPB2P35606 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.89■□□□□ 0.29
COPB2P35606 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.89■□□□□ 0.29
COPB2P35606 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.89■□□□□ 0.29
COPB2P35606 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.89■□□□□ 0.29
COPB2P35606 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
COPB2P35606 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.89■□□□□ 0.29
COPB2P35606 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
COPB2P35606 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COPB2P35606 AC136759.1-202ENST00000530858 2194 ntBASIC16.89■□□□□ 0.29
COPB2P35606 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 AC006480.2-201ENST00000609770 1337 ntBASIC16.89■□□□□ 0.29
COPB2P35606 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
COPB2P35606 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.89■□□□□ 0.29
COPB2P35606 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.89■□□□□ 0.29
COPB2P35606 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COPB2P35606 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
COPB2P35606 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COPB2P35606 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.88■□□□□ 0.29
COPB2P35606 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.88■□□□□ 0.29
COPB2P35606 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.88■□□□□ 0.29
COPB2P35606 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COPB2P35606 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.88■□□□□ 0.29
COPB2P35606 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.88■□□□□ 0.29
COPB2P35606 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.88■□□□□ 0.29
COPB2P35606 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.88■□□□□ 0.29
COPB2P35606 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.88■□□□□ 0.29
COPB2P35606 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
COPB2P35606 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COPB2P35606 MIR3188-201ENST00000583494 85 ntBASIC16.88■□□□□ 0.29
COPB2P35606 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
COPB2P35606 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
COPB2P35606 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.88■□□□□ 0.29
COPB2P35606 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms